Protein Info for CA265_RS02810 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hemolysin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 583 PF19576: Acyltransf_2" amino acids 30 to 271 (242 residues), 79.4 bits, see alignment E=3.2e-26 PF01553: Acyltransferase" amino acids 70 to 198 (129 residues), 24.7 bits, see alignment E=2.7e-09 PF13444: Acetyltransf_5" amino acids 339 to 440 (102 residues), 81.9 bits, see alignment E=7.4e-27

Best Hits

KEGG orthology group: None (inferred from 84% identity to phe:Phep_0834)

Predicted SEED Role

"Putative hemolysin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z0N0 at UniProt or InterPro

Protein Sequence (583 amino acids)

>CA265_RS02810 hemolysin (Pedobacter sp. GW460-11-11-14-LB5)
MKIITTSEFAKATKIDKLGVPGLAGLMMEIMKLNDINDVFAQNQHFKGLEFVDKILETIG
VSIEFDDDDLNSIPKTGPFIAIANHPYGGVEGLALVKLLCTVRPDAKVMVNFILKKIPNL
DEFFVAVNPFENVQHSSSISGLKTTFDLLRNGTPIGIFPAGEVSTFKLDAQQVTDRMWHP
VVGKLIAKAKVPVVPIYFHGNNGVFFNILSFIHPTLRTAKLPSEFLNKHGRTIKVRIGKP
IAVSEISHMNSSNKLMDFLRARTYALGVGLDTEKKLFNPLNLFKIKKKPVEVIEETSREL
IKNEVVLLEDFKVWTEKNYEVYIVPTLKIPNILREIGRLREITFREVGEGTNKKIDLDNY
DIYYNHLFIWDKDLENIVGAYRIGKGDEILESMGRRGFYLSELFKMKDQFYPMLRQGIEL
GRSWIRKEYQGKPLPLFLLWKGILKYLIDNPQYRYMFGPVSISNNFSKFSKALIVDYITK
NHFDYEMAKYVKPRNKFKADLLPIATDTLVDSSESFKDLDSIIGDIENSHIKIPVLLRQY
MNLNAKIISFNIDPKFSDCLDGFLVVDTHNIPPEMLEKLGKNL