Protein Info for BWI76_RS27920 in Klebsiella michiganensis M5al

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 408 PF12566: DUF3748" amino acids 64 to 179 (116 residues), 188.7 bits, see alignment E=3.1e-60 PF07676: PD40" amino acids 378 to 403 (26 residues), 17.1 bits, see alignment (E = 4.4e-07)

Best Hits

Swiss-Prot: 75% identical to YIDR_ECOLI: Uncharacterized protein YidR (yidR) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 82% identity to kpu:KP1_5470)

Predicted SEED Role

"Uncharacterized protein YidR"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AV70 at UniProt or InterPro

Protein Sequence (408 amino acids)

>BWI76_RS27920 hypothetical protein (Klebsiella michiganensis M5al)
MKQVTFAPRHHQLTNTHTWTADSRWLVFDVRPSGASFTGETIERVNVETGEVEILYRAGQ
GAYVGVVTVHPSVDKYVFIHGPENPDKRWHYDFHHRRGVVTYQGETRNLDAMDITPPYTP
GALRGGSHVHVFSPNGELVSFTYNDHVLHERDPALDLRNVGVAVPYGPVIPRGDHPRQYG
GSHWCVLVSRTTSSPAPGSDEINRAYEEGWVGDRALAFIGDTRAINGDKVPELFIVELPQ
SEQGWKQSGDAPLAGTDATMPAPPAGVVQRRLTFTHERRYPGLVNTPRHWVRANPQATEM
AFLLRDDAGVAQMWLISSQGDGLRQLTHNRSDIQSAFNWHPSGKWLGFVLENRIALCDAL
SGDILFLTDEHANPPSADAIVFSPDGKQLAWMEEVDGYRQLWVTATGR