Protein Info for BWI76_RS26325 in Klebsiella michiganensis M5al
Annotation: altronate hydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Altronate dehydratase (EC 4.2.1.7)" (EC 4.2.1.7)
MetaCyc Pathways
- superpathway of hexuronide and hexuronate degradation (9/10 steps found)
- D-galacturonate degradation I (5/5 steps found)
- superpathway of microbial D-galacturonate and D-glucuronate degradation (19/31 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 4.2.1.7
Use Curated BLAST to search for 4.2.1.7
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A285BAT8 at UniProt or InterPro
Protein Sequence (531 amino acids)
>BWI76_RS26325 altronate hydrolase (Klebsiella michiganensis M5al) MQTILKIDPTDNLIVALQDLRKEQQVNWNDEAYVLRSDVKAKHKFATEDIAPGDIVSLYG VPVGKATRPIARGEAITTDNIKHYAAPVSLNDVAPYDWQQPDVFAWQQRTFKGIVREDGR VATANYWLVIPLVFCENRNVQRVTDALNDALGYANNGLKNFARQVTSAGALNDTRHLPFP HLDGIRCITVNSGCGGATSDSMTMCDVLAAYSDHPNVLGVTVFALGCEKARIVDFKAALA KRNPNFSKPIIYFRQQDWSSEEKMMQDALTETYNAIREAPVAERQNVPLSRLKIGVKCGA SDGFSGISANPAMGEVSDRLVALGGASGLAEFPELCGAEGDIVQRCTTRELKEKFLSLMK NYEHVANFFGTTIADNPSPGNIADGLITDAIKSAGAAKKGGRAPVSAVCDYAEPMGESGL SLVCTPGNDVDAVTGLVAAGCNVVIFSTGLGTPTGNPIVPVLKVSTNSALAKKMPDIIDY DCGPIIEGTPLADIADGLFEKIIATASGTWRTKADALEQYDFMLWKRSLEL