Protein Info for BWI76_RS25850 in Klebsiella michiganensis M5al

Annotation: prepilin peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 158 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details transmembrane" amino acids 18 to 21 (4 residues), see Phobius details amino acids 42 to 51 (10 residues), see Phobius details amino acids 53 to 74 (22 residues), see Phobius details amino acids 83 to 100 (18 residues), see Phobius details amino acids 106 to 124 (19 residues), see Phobius details amino acids 136 to 154 (19 residues), see Phobius details PF01478: Peptidase_A24" amino acids 14 to 115 (102 residues), 83.1 bits, see alignment E=9e-28

Best Hits

Swiss-Prot: 55% identical to HOPD_ECOLX: Leader peptidase HopD (hopD) from Escherichia coli

KEGG orthology group: None (inferred from 62% identity to eae:EAE_04965)

Predicted SEED Role

"Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)" in subsystem Type IV pilus (EC 2.1.1.-, EC 3.4.23.43)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.1.1.-, 3.4.23.43

Use Curated BLAST to search for 2.1.1.- or 3.4.23.43

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285BAF9 at UniProt or InterPro

Protein Sequence (158 amino acids)

>BWI76_RS25850 prepilin peptidase (Klebsiella michiganensis M5al)
MTVATFAFFIIHGGLLLTLCWHDLRYGLLPDKFTCPLLWSGLLYYLCLSPANLVQAVWGA
IGGYLAFGLIYWLYRGIRRREGIGYGDIKFLAALGAWHGWEVLPQLVLIAAILACAAVTA
LILCTRTRQTLHHPLPFGPFLAAAGVFCGWQTFISQPL