Protein Info for BWI76_RS25755 in Klebsiella michiganensis M5al
Annotation: 30S ribosomal protein S5
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to RS5_ENT38: 30S ribosomal protein S5 (rpsE) from Enterobacter sp. (strain 638)
KEGG orthology group: K02988, small subunit ribosomal protein S5 (inferred from 99% identity to eco:b3303)MetaCyc: 99% identical to 30S ribosomal subunit protein S5 (Escherichia coli K-12 substr. MG1655)
Predicted SEED Role
"SSU ribosomal protein S5p (S2e)" in subsystem Ribosomal protein S5p acylation or Ribosome SSU bacterial
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A285BAE3 at UniProt or InterPro
Protein Sequence (167 amino acids)
>BWI76_RS25755 30S ribosomal protein S5 (Klebsiella michiganensis M5al) MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI QKAMEKARRNMINVALNHGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGV HNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK