Protein Info for BWI76_RS24430 in Klebsiella michiganensis M5al

Annotation: fimbrial assembly protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 244 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF00345: PapD_N" amino acids 24 to 141 (118 residues), 128.5 bits, see alignment E=1.4e-41 PF02753: PapD_C" amino acids 166 to 221 (56 residues), 31 bits, see alignment E=2.5e-11

Best Hits

Swiss-Prot: 52% identical to YQIH_ECOLI: Uncharacterized fimbrial chaperone YqiH (yqiH) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 65% identity to esc:Entcl_0711)

Predicted SEED Role

"Hypothetical fimbrial chaperone yqiH"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285BA07 at UniProt or InterPro

Protein Sequence (244 amino acids)

>BWI76_RS24430 fimbrial assembly protein (Klebsiella michiganensis M5al)
MKINVMTKGILCLAGASFAANAAVSPDRTRIIYNQSDKSVSVRLTNQSPDTPFLAQSWIE
DKDNKKSRTYITAIPPMLRLEAGEQAQVRLMGQATLAQLPADRESLFYYNIREIPPRSEQ
KNVMQIAMQSRIKLFWRPKAIEIPDGQVNLVGKVDISRTASGLTLKNKSPYFITVGYIGV
NGKTLLPKTASMMAEPFGQAVQEIKNLPANFQVGYIGDYGGLHMFKISCNSVQATCQSEP
VKKE