Protein Info for BWI76_RS24425 in Klebsiella michiganensis M5al

Annotation: fimbrial protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 842 transmembrane" amino acids 21 to 38 (18 residues), see Phobius details PF13954: PapC_N" amino acids 39 to 183 (145 residues), 116 bits, see alignment E=2.1e-37 PF00577: Usher" amino acids 201 to 753 (553 residues), 554 bits, see alignment E=7.1e-170 PF13953: PapC_C" amino acids 767 to 821 (55 residues), 42.3 bits, see alignment 8.3e-15

Best Hits

Swiss-Prot: 56% identical to YQIG_ECOLI: Putative outer membrane usher protein YqiG (yqiG) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 70% identity to esc:Entcl_0712)

Predicted SEED Role

"Uncharacterized outer membrane usher protein yqiG precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B9K5 at UniProt or InterPro

Protein Sequence (842 amino acids)

>BWI76_RS24425 fimbrial protein (Klebsiella michiganensis M5al)
MRNLIYSDLTPKGLSLLIKRALYSVCMVFSLSTSIYAIEFNTDMIDAEDRENVDLSQFEK
KGYIPVGTYLVRVQINKNTLPRAYNLEWIKSDNENGSLLCLTQEHLTEFGFADAFILSLQ
PLNPQGCLDLSHKSDLVTRLDKANMILTLTVPQAWMKYRAKNWTPPEFWDVGVTGFIMDY
NLYASQYVPSHGDSNQNVNTYGTLGFNLGAWRLRSDYQYDQSFTENNSNGSNSSLPRTYL
FRPIPSLASKLTMGQYDLSSDLYDTFHFTGASLESDEQMLPPDLRGYAPQISGIAQTNAR
VTVSQNGRTLYQTSVSPGPFTITDLGTTLQGQLDVTIEEEDGRKSTFQVGSASIPFLTRQ
GQIRYKSSVGKPTSTTHNDINNPLFWTGEISWGWLSDISLYGGAIVTADDYQAATSGIGF
NLNSFGSLSFDVTRAEANLRDDNEGKQRGFSYRANYSKRFEETGSQITFAGYRFSDKEYV
TMSEYINSRDGNNTNNNEKESYVLSFNQYIEPLALNSYLSITRNTYWNSDTNTNYSFSVS
RNFDIGDFKNMSASLAMSRVSWGDDEENQYYFSISVPFENNRNVTYSLQRYGDDAATQTA
TYYDSSDRNNTWNLSVSGSDKDYSDGEAALRGYYQHYSPWGRLNVNGSVQPSNYRTLSAG
WNGSFTATRYGAAFHDYSPGNSSRVMVDADSISGVEVNNNRSKTNIFGISVVPSVGNYTT
ATVMVNNNNLPEGVDVTNSVIRTTLTEGAIGYMPLSATKGYQIIGVIRLEDGRYPPLGVT
VTDKSTGRDIGLVADDGFVYLSGVQENSILTLKWNDKACDITPPNHSNADGQAVILPCKS
QH