Protein Info for BWI76_RS24185 in Klebsiella michiganensis M5al

Annotation: membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 238 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 35 to 60 (26 residues), see Phobius details amino acids 106 to 126 (21 residues), see Phobius details amino acids 146 to 174 (29 residues), see Phobius details amino acids 180 to 206 (27 residues), see Phobius details amino acids 214 to 236 (23 residues), see Phobius details PF04474: DUF554" amino acids 3 to 230 (228 residues), 221.2 bits, see alignment E=6e-70

Best Hits

Swiss-Prot: 78% identical to YQGA_ECOLI: Uncharacterized protein YqgA (yqgA) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 94% identity to eae:EAE_03220)

Predicted SEED Role

"Putative inner membrane protein YqgA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B9L1 at UniProt or InterPro

Protein Sequence (238 amino acids)

>BWI76_RS24185 membrane protein (Klebsiella michiganensis M5al)
MVTGPFINAGAVLLGGVLGALLSQRLPERIRTSMTSIFGLASLGIGILLVIKCANLPVMV
LSTLVGALLGEVCNMEKGINTLVSKLQQLLSPKKGQKKVSAHESYIQSYVAIIVLFCASG
TGIFGAMREGMTGDASILIAKAFLDFFTATIFACTLGLAVSAICVPMLAIQLALAACASL
IMPLTTPMMMADFTAVGGMLLVATGLRICGIKMFAVVNMLPALVLAMPISVAWTAFFA