Protein Info for BWI76_RS24110 in Klebsiella michiganensis M5al

Annotation: YggU family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 96 TIGR00251: TIGR00251 family protein" amino acids 6 to 88 (83 residues), 103.7 bits, see alignment E=2.4e-34 PF02594: DUF167" amino acids 10 to 81 (72 residues), 91.8 bits, see alignment E=1.2e-30

Best Hits

Swiss-Prot: 94% identical to Y722_KLEP3: UPF0235 protein KPK_0722 (KPK_0722) from Klebsiella pneumoniae (strain 342)

KEGG orthology group: K09131, hypothetical protein (inferred from 93% identity to kva:Kvar_0694)

Predicted SEED Role

"COG1872"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B973 at UniProt or InterPro

Protein Sequence (96 amino acids)

>BWI76_RS24110 YggU family protein (Klebsiella michiganensis M5al)
MSAVEACADGLVLRLYIQPKASRDSIVGLHGDELKVAITAPPVDGQANAHLVKFLAKQFR
VAKSQVLIEKGELGRHKQIKIIHPQQIPDGVAALTE