Protein Info for BWI76_RS23735 in Klebsiella michiganensis M5al

Annotation: sugar diacid utilization regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 385 PF05651: Diacid_rec" amino acids 4 to 136 (133 residues), 139.7 bits, see alignment E=7.1e-45 PF17853: GGDEF_2" amino acids 145 to 261 (117 residues), 30.5 bits, see alignment E=5.7e-11 PF13556: HTH_30" amino acids 311 to 367 (57 residues), 45.7 bits, see alignment E=6.9e-16

Best Hits

KEGG orthology group: None (inferred from 94% identity to kpu:KP1_2740)

Predicted SEED Role

"Sugar diacid utilization regulator SdaR" in subsystem D-galactarate, D-glucarate and D-glycerate catabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B9G6 at UniProt or InterPro

Protein Sequence (385 amino acids)

>BWI76_RS23735 sugar diacid utilization regulator (Klebsiella michiganensis M5al)
MIITTALANEIVARAMAIIHHNVNVIDHHGQIIASGERHRIGEQHEIAREVIRTGKRICI
NNTAEAARFQNVHPGINHPIMYDDRVVMVVGISGDPAAISRYAELAVLTAELLVRQAIEM
RETNWRQRLRDTLFCQYLEQGAAPAGQEALHRLVELGFNFNAPLMPVVVTVQVEQHQLSE
VLSTLLREFSQLSGVRDVILLGSNEILILNTLCEPQETMLRGIEFVLSNQISHYHIGIGV
QADNAPDIREAIRFARSVIEVGSKVQPQRQIYYFREMAMLCLFRVLEDSYMVNFFINNVR
QLLEHDSGEVLLDTLSSFIANNAEPGKTSLLLGIHRNTLTYRLQQIKKHIQLDPMVFTDL
TQLAVSVHCYRRQNPRQSEWIDTLS