Protein Info for BWI76_RS23605 in Klebsiella michiganensis M5al

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 90 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details transmembrane" amino acids 37 to 57 (21 residues), see Phobius details amino acids 69 to 88 (20 residues), see Phobius details PF17090: Ytca" amino acids 25 to 88 (64 residues), 65.6 bits, see alignment E=2.3e-22

Best Hits

Swiss-Prot: 34% identical to YTCA_ECOK1: Uncharacterized protein YtcA (ytcA) from Escherichia coli O1:K1 / APEC

KEGG orthology group: None (inferred from 77% identity to kva:Kvar_0768)

Predicted SEED Role

"FIG00731616: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B974 at UniProt or InterPro

Protein Sequence (90 amino acids)

>BWI76_RS23605 hypothetical protein (Klebsiella michiganensis M5al)
MNRIVKLARPSLLFSLFTLTGCSLSPAIPVLGAAFPGWFFCLLGASLLLIPCHILIVRQG
WQSRFSPLVFSYLALMFLFATILWFLFFVN