Protein Info for BWI76_RS23490 in Klebsiella michiganensis M5al

Annotation: fimbrial protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 331 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF22003: MrkDrd" amino acids 35 to 179 (145 residues), 176.8 bits, see alignment E=2.2e-56 PF00419: Fimbrial" amino acids 182 to 331 (150 residues), 57.6 bits, see alignment E=1.9e-19

Best Hits

KEGG orthology group: None (inferred from 85% identity to cko:CKO_00964)

Predicted SEED Role

"putative fimbrial-like protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B882 at UniProt or InterPro

Protein Sequence (331 amino acids)

>BWI76_RS23490 fimbrial protein (Klebsiella michiganensis M5al)
MSLMKKMTLFIGLMAMGITSAWAYCTRLSQPTVSLDMVVGRVVVPPDLPVGSVIVSRDWT
MSAPGGASYSCSSGTNRFVAKIVAPGATDLGNKIYSTNVPGIGLRFSRGGATVNIIYPGA
YSSYVSRTTNYSLEGSRFTLEVIKTASVTGSGTLAAGKYTSYDWENGNNPILETRLSANA
ITVVSPSCTILSGKNMNVDVGTIKRSDLNGVGTTAGGKDFNIELQCSGGLSESGYANIQT
SFSGTLASGTTVSRGALLNEKAGSSLAKGIGIQVLKDGVPLEFNKKYSAGTLRTQETRYI
TLPLHARFYQYAPTTSTGEVESHMIFNLTYD