Protein Info for BWI76_RS21695 in Klebsiella michiganensis M5al

Annotation: glycosyl transferase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 329 PF13641: Glyco_tranf_2_3" amino acids 6 to 134 (129 residues), 53.5 bits, see alignment E=6.4e-18 PF10111: Glyco_tranf_2_2" amino acids 8 to 107 (100 residues), 34 bits, see alignment E=4.6e-12 PF00535: Glycos_transf_2" amino acids 8 to 143 (136 residues), 110.8 bits, see alignment E=1.5e-35 PF13704: Glyco_tranf_2_4" amino acids 34 to 100 (67 residues), 30.8 bits, see alignment E=6.4e-11

Best Hits

KEGG orthology group: None (inferred from 68% identity to eae:EAE_08875)

Predicted SEED Role

"Beta-1,3-glucosyltransferase" in subsystem LOS core oligosaccharide biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (329 amino acids)

>BWI76_RS21695 glycosyl transferase family protein (Klebsiella michiganensis M5al)
MKINIDISVIIPAFNAADSIGVLVHTLLGETTLSTEIIVVDDGSTDETWTVLSAITDERL
ILIRQENQGVYAARNAALAIYRGEWVVFLDADDRVAADFLQERLRTAREAQADVVLFNAR
HTDSVGHLRHPVHRRQPYGQTLTGQQWIRHCVSQREWPHYLWLQIIRSAYIREHDLRFQE
GKSHKDILWTIQLAAADGRFYFSDIQDYLWVNNPASITHRSDYYDIRAFSYSDVIADILA
LSAQMQYRSVRRALVRHALVESRHFLGLYRRRVNDRHAVRARFRVRIAFRHLVPGVSNLS
DVFFLLKLVRNIYLPGVRNTPAAVSQLRR