Protein Info for BWI76_RS20355 in Klebsiella michiganensis M5al

Annotation: colicin V production protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 162 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details amino acids 31 to 52 (22 residues), see Phobius details amino acids 64 to 87 (24 residues), see Phobius details amino acids 99 to 120 (22 residues), see Phobius details PF02674: Colicin_V" amino acids 4 to 142 (139 residues), 133.9 bits, see alignment E=2.1e-43

Best Hits

Swiss-Prot: 93% identical to CVPA_ECOLI: Colicin V production protein (cvpA) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 98% identity to eae:EAE_24565)

Predicted SEED Role

"Colicin V production protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B7L5 at UniProt or InterPro

Protein Sequence (162 amino acids)

>BWI76_RS20355 colicin V production protein (Klebsiella michiganensis M5al)
MVWIDYAIIAVIGFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLAVWFTGFEDELV
RNGIAIAILFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGICFGALRGVLIVSAILFFL
DSFTGMAKSEDWQKSELIPQFSFVIRWFFDYLQSSSSFLPKA