Protein Info for BWI76_RS19210 in Klebsiella michiganensis M5al

Annotation: LuxR family transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 PF03472: Autoind_bind" amino acids 16 to 171 (156 residues), 90.8 bits, see alignment E=9.8e-30 PF08281: Sigma70_r4_2" amino acids 182 to 230 (49 residues), 29.5 bits, see alignment 7.1e-11 PF00196: GerE" amino acids 188 to 242 (55 residues), 58.2 bits, see alignment E=7.4e-20

Best Hits

KEGG orthology group: None (inferred from 82% identity to ddc:Dd586_2919)

Predicted SEED Role

"Transcriptional regulator ahyR/asaR family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B6L1 at UniProt or InterPro

Protein Sequence (250 amino acids)

>BWI76_RS19210 LuxR family transcriptional regulator (Klebsiella michiganensis M5al)
MRLEFERPGSARAASLDEAFSGLFQATRKLGFDAVIYDYTPVPRSLEGELITPSLLKTCN
VPEDMRQLWCERGYYQLDPVQHCALESCAPFVWSYQRPDNSMLRGRLNNHATAVTDYMRE
HNMPCGATVPLHLPNGSFVTLTGIHTGQRQEREISATLAQLMLLAHQFQESAFPLFDSTL
LTCRHVKLSNRERECLAWSAEGLTAKEIARKLHRSVATVTLHLNTAAKKLGASNRVQAVV
RALHYRLLDS