Protein Info for BWI76_RS19045 in Klebsiella michiganensis M5al

Annotation: capsular polysaccharide biosynthesis protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 322 transmembrane" amino acids 7 to 27 (21 residues), see Phobius details amino acids 77 to 98 (22 residues), see Phobius details amino acids 112 to 137 (26 residues), see Phobius details amino acids 143 to 168 (26 residues), see Phobius details amino acids 179 to 199 (21 residues), see Phobius details amino acids 219 to 237 (19 residues), see Phobius details amino acids 249 to 272 (24 residues), see Phobius details amino acids 279 to 304 (26 residues), see Phobius details PF14897: EpsG" amino acids 18 to 309 (292 residues), 94.9 bits, see alignment E=2.8e-31

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (322 amino acids)

>BWI76_RS19045 capsular polysaccharide biosynthesis protein (Klebsiella michiganensis M5al)
MIIKKERLLTIIFIIIPYVLFCAYMVGIKDPLVWRDYGVYLNYFDDSANDIIYIITNIQD
PVFVLLMHPFHSLAEGFDIFLFWCAIITLSLKIYSISLATQRFSFFLVLYSSYLLCLHDY
IQIRIALALAIFCYAMYVRKGWVQFLLFVVSIFVHLSLVVPLCIFCLVHAKRIGYKRIFW
SGPAIIALSLLIQQGAVFISRVNQYLELQKQGIGVDINVYSVLPFFQLLTVLFVFFNKKL
ISYKYTFEFVMSYVGVIIFYSTLAIPAVALRYFEISNLFFIILLSRLFFKSYFFIAIFFM
YIIVGIKNYGQLLNLNIPFLTS