Protein Info for BWI76_RS17570 in Klebsiella michiganensis M5al

Annotation: iron-sulfur-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 152 PF00111: Fer2" amino acids 7 to 57 (51 residues), 25.6 bits, see alignment E=9.6e-10 PF01799: Fer2_2" amino acids 74 to 147 (74 residues), 103.9 bits, see alignment E=4.1e-34

Best Hits

Swiss-Prot: 48% identical to CUTC_SULAC: Glyceraldehyde dehydrogenase small chain (cutC) from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)

KEGG orthology group: K03518, carbon-monoxide dehydrogenase small subunit [EC: 1.2.99.2] (inferred from 91% identity to cro:ROD_33891)

MetaCyc: 54% identical to glycolaldehyde oxidoreductase small subunit (Saccharolobus solfataricus P2)
1.2.99.-

Predicted SEED Role

"Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)" in subsystem Purine Utilization (EC 1.17.1.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.17.1.4

Use Curated BLAST to search for 1.17.1.4 or 1.2.99.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B5M9 at UniProt or InterPro

Protein Sequence (152 amino acids)

>BWI76_RS17570 iron-sulfur-binding protein (Klebsiella michiganensis M5al)
MNHIELKVNGIRIARDVKDNVRLIDFLREELKLTGTKEGCSVGECGACTVIMDGKSVCSC
LLLAAQCNGVEVTTVEALHHDPVGKKLQNAFIRHGGVQCGFCTPGVLMSAKALLDTNPNP
SDDELKEALEGNICRCTGYQPIITSIKAVLKS