Protein Info for BWI76_RS17425 in Klebsiella michiganensis M5al

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 130 transmembrane" amino acids 6 to 28 (23 residues), see Phobius details amino acids 48 to 67 (20 residues), see Phobius details amino acids 74 to 93 (20 residues), see Phobius details amino acids 105 to 126 (22 residues), see Phobius details PF04247: SirB" amino acids 5 to 126 (122 residues), 136.6 bits, see alignment E=2.4e-44

Best Hits

Swiss-Prot: 68% identical to SIRB2_SALTI: Protein SirB2 (sirB2) from Salmonella typhi

KEGG orthology group: None (inferred from 87% identity to eae:EAE_16740)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B5K2 at UniProt or InterPro

Protein Sequence (130 amino acids)

>BWI76_RS17425 hypothetical protein (Klebsiella michiganensis M5al)
MNLFNAVLYLHIACVVVSVSLFVLRYWWRWSGNRLLDQRWVRIAPHCSDTLLFLSGAGLM
AITHYLPFTEEGTWLTEKLFGVIIYIALGFIALGRRRSRSQQSRFVAFLLALVVLFIIIQ
LAITRIPLLG