Protein Info for BWI76_RS17355 in Klebsiella michiganensis M5al
Annotation: YchO family inverse autotransporter domain-containing protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 66% identical to YCHO_ECOLI: Uncharacterized protein YchO (ychO) from Escherichia coli (strain K12)
KEGG orthology group: None (inferred from 83% identity to eae:EAE_16810)Predicted SEED Role
"Invasin"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A285B555 at UniProt or InterPro
Protein Sequence (459 amino acids)
>BWI76_RS17355 YchO family inverse autotransporter domain-containing protein (Klebsiella michiganensis M5al) MSSLPFRVTPLLPLLLLLTGMPARALQDNQAFSKGPETLPDLGLAPQVDDDAKHFAEMAK KFGEASMSDNGLTTSEQARVFAIGKLGNEVSHQLENWLSPWGNANVDLLVDKEGNFTGSK GSWFVPLQDNGDYLTWNQYSVTQRDTGLVGNIGLGQRWRMGSWLLGYNSFYDKALDDRMA RGSVGAEAWGESLRLSANYYQPLGSWQQGSSLTQQQRMASGYDVTAQARLPFYQHINTSV SVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGESGVSQNDVGLKLN YRFGVPLKQQLAADEVAVSRSLRGSRYDSPERDNLPVVEYRQRKTLSVYLATPPWDLQPG ETVQLKLQIRSLHGIKSLSWQGDTQALSLTSPIEANSTDGWTVIMPRWSSEAGASNRWHL SLVVEDKTGQRVSSNEIALALTEPLVHVPAEGVSWPQQP