Protein Info for BWI76_RS17015 in Klebsiella michiganensis M5al

Annotation: fimbrial assembly protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 847 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF13954: PapC_N" amino acids 34 to 179 (146 residues), 143.3 bits, see alignment E=8.4e-46 PF00577: Usher" amino acids 197 to 754 (558 residues), 647.3 bits, see alignment E=3.7e-198 PF13953: PapC_C" amino acids 764 to 829 (66 residues), 76.2 bits, see alignment 2.2e-25

Best Hits

KEGG orthology group: K07347, outer membrane usher protein (inferred from 77% identity to enc:ECL_02380)

Predicted SEED Role

"type 1 fimbriae anchoring protein FimD"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B584 at UniProt or InterPro

Protein Sequence (847 amino acids)

>BWI76_RS17015 fimbrial assembly protein (Klebsiella michiganensis M5al)
MTIKNNKLRPARLATLIAFAFTGISQELYASDSFNTALVELDNPGVGKADLSAFESGSQA
PGTYHVDIILDDQLMDTRDIPFAMAKTADGSEALQPCLSIELLKQWGVKTDLFPQLAVEE
SDCANLQAIPQASADFQFGAQRLVISIPQAAIDLPARGYVPPEMWDEGITAAMLNYSLSG
ANNWAKTGQGASSDSQYANLRPGINIGPWRFRNYTTWSRESSGQDKWDTVYTYAQRAIIP
LKGQLTVGDSSAPADVFDSMPFRGGQLASDDDMLPDSLKGYAPVVRGIARTNAQVVVRQN
GYQIYQSYVAPGAFEIRDMYPTGGAGDLDVTIKEADGSEQHFTLPYASLPVLQREGRLKY
AITGGQYRSYNSSVDKTPFGQATAIYGLQHGITLYGGLQESSKYQSLAFGVGKNMGALGA
ISADVTQSWSTPDKTEKSQGQCWRARYSKNFAGTGTHFSIAGYRYSTSGYYGMQEVLDSY
GDSSALQERRRNRAELTMSQTLSRELGSLTLSAAREDYWNSARSMASWSVGYNNYWRNIS
YGLTWTYSRNGSAASYDGGRGRNSDHDQQLAFNVSVPLEKFLPQTWASYGMNASKNNGTT
HNIGINGVALENNSLNWNVQQGYGTNGVGYIGNMNGDYKATYGEVTAGYSYDRNSERLNY
GLQGGVIAHADGITLSQPLGETNVLIKAPGAYGVNIRNQPGARTDYRGYTVVSNISVYRK
NDLTLDPQSMPDDVELEINTDTVTPTRGAVVRADYLAKVGRRVLMTLTDNNHFVPFGAVV
TLADGNQSNFIVGDRGQVFLSGMPEQGAIVATWGRQSSQQCRADFSLPKQSTYAGITEVS
ASCHQER