Protein Info for BWI76_RS16600 in Klebsiella michiganensis M5al

Annotation: DUF421 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 54 to 74 (21 residues), see Phobius details PF04239: DUF421" amino acids 83 to 147 (65 residues), 48.7 bits, see alignment E=2.9e-17

Best Hits

KEGG orthology group: None (inferred from 89% identity to ent:Ent638_3133)

Predicted SEED Role

"FIG00626239: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B504 at UniProt or InterPro

Protein Sequence (148 amino acids)

>BWI76_RS16600 DUF421 domain-containing protein (Klebsiella michiganensis M5al)
MEMVLRALAIYLILLVVFKIAGRRALLQMTSFDLILLLIISEATQQALLGNDFSVTGAML
TIMTLVVVDMLFGLMKKYTAGAESALDGCPVILVENGVPLIDKLKKVDVSCDDILVAARQ
NQGITELSKIKYAILERNGHISIIPAES