Protein Info for BWI76_RS13835 in Klebsiella michiganensis M5al

Annotation: 30S ribosomal protein S22

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 46 PF08136: SRA_like" amino acids 1 to 45 (45 residues), 80.7 bits, see alignment E=4.1e-27

Best Hits

Swiss-Prot: 58% identical to SRA_SHISS: Stationary-phase-induced ribosome-associated protein (sra) from Shigella sonnei (strain Ss046)

KEGG orthology group: K02972, small subunit ribosomal protein S22 (inferred from 87% identity to kpe:KPK_2509)

MetaCyc: 58% identical to ribosome-associated protein Sra (Escherichia coli K-12 substr. MG1655)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B3X5 at UniProt or InterPro

Protein Sequence (46 amino acids)

>BWI76_RS13835 30S ribosomal protein S22 (Klebsiella michiganensis M5al)
MKSNQQARHLLGLNYKLSQQKKVLLEGDAETTVNHVRATGRKRRGG