Protein Info for BWI76_RS13630 in Klebsiella michiganensis M5al

Annotation: ABC transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 233 PF00005: ABC_tran" amino acids 22 to 168 (147 residues), 133 bits, see alignment E=1.2e-42

Best Hits

KEGG orthology group: None (inferred from 84% identity to ent:Ent638_2071)

Predicted SEED Role

"Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)" in subsystem Polyamine Metabolism (TC 3.A.1.11.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B3T9 at UniProt or InterPro

Protein Sequence (233 amino acids)

>BWI76_RS13630 ABC transporter (Klebsiella michiganensis M5al)
MRALTSIKLDGVSFAFGAHTVLNQIDLHIDAGSTVALLGPSGCGKSTLLRLLAGLTVPAS
GSIHFGDRLVAKAGWGMPPEQRNLGMVFQDYALWPHMTAAQNVAFPLRMRGVGRQQRQHR
VEEALALVGLSGFADRKPSGLSGGQQQRIALARAIVAEPRVLLFDEPLSNLDSELRESLC
IEMSRLLRQLGITAVYVTHDRREAELLADKIVHLSAGCVAAVRAVSSSSGEPA