Protein Info for BWI76_RS13505 in Klebsiella michiganensis M5al

Annotation: putative receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 353 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF21783: YNCE" amino acids 71 to 333 (263 residues), 35.9 bits, see alignment E=1.1e-12 PF13360: PQQ_2" amino acids 110 to 303 (194 residues), 24.3 bits, see alignment E=4.7e-09

Best Hits

Swiss-Prot: 78% identical to YNCE_SALTY: Uncharacterized protein YncE (yncE) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: None (inferred from 91% identity to eae:EAE_20055)

Predicted SEED Role

"FIG00731341: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B3F0 at UniProt or InterPro

Protein Sequence (353 amino acids)

>BWI76_RS13505 putative receptor (Klebsiella michiganensis M5al)
MSLRHLSAPRLRRSLLLTSLLLAGSFSAHAAEEMLRKAVGKGAYEMAYSQQENALWVATS
QSRSLDKGGIVYRLDPTTLEVTQIIHNDLKPFGATINNATQTLWFGNTTDSSVTAIDAKT
GKVKGRLVLDPRQRSETVRPLAPRELAVNEKTKTVYITGLGKESVIWVVDGDKLTLKDTI
ANTGAMATGLAVDAEANRIYTTNADGELVTIDSASNKILTRKKLQDDGKEHFYLNLSLDT
AGHRAFITDGKQPEVLVVDIRDGKVLEKIAAPESLAVLFNPTRNEAYVTHRKAGEVSVID
GKTYKVVKTFKTPTHPNSLTLSADGKTLYVSVKQESTRQKEATQPDDVIRIAL