Protein Info for BWI76_RS13345 in Klebsiella michiganensis M5al

Annotation: DUF3313 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 222 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF11769: DUF3313" amino acids 30 to 212 (183 residues), 200.2 bits, see alignment E=1.4e-63

Best Hits

Swiss-Prot: 73% identical to YDCL_ECOLI: Uncharacterized lipoprotein YdcL (ydcL) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 89% identity to eae:EAE_20205)

Predicted SEED Role

"Uncharacterized membrane lipoprotein clustered with tellurite resistance proteins TehA/TehB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B3G5 at UniProt or InterPro

Protein Sequence (222 amino acids)

>BWI76_RS13345 DUF3313 domain-containing protein (Klebsiella michiganensis M5al)
MRTQLFFKVAALAGLLALAGCSSKIAKPEQYSGFLKDYSNLKETTSASGKPELRWISPDY
NPSNYDNVVYNPITYYPVPKPTTQVGEKALSDILNYTNKEMKQAISERKPLATTAGKRSL
IFRGAITGVDSSKEGLQFYEVIPVAMIIAGTQAATGHRTMDTNLYFEGELIDAATKKPVI
KVVRKGEGKNLSNENTPLTVETLKQVIDDMAIDAVKFDPNNR