Protein Info for BWI76_RS13295 in Klebsiella michiganensis M5al

Annotation: DUF1338 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 PF21723: DUF1338_N" amino acids 9 to 191 (183 residues), 208.6 bits, see alignment E=6.5e-66 PF07063: DUF1338" amino acids 196 to 401 (206 residues), 219.4 bits, see alignment E=3.7e-69

Best Hits

Swiss-Prot: 84% identical to YDCJ_ECOLI: Uncharacterized protein YdcJ (ydcJ) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 92% identity to eae:EAE_20280)

Predicted SEED Role

"FIG074102: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B399 at UniProt or InterPro

Protein Sequence (447 amino acids)

>BWI76_RS13295 DUF1338 domain-containing protein (Klebsiella michiganensis M5al)
MANTITADEIRESFSQAMSAMYQQEVPQYGTLLELVADVNLAILENNPTLHEQLANADEL
ARLNVERHGAIRVGTAEELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDAALA
RNPFRVFTSLLRLELIADEALRKRAAEILARRDIFTSRCRELIALHEQKGEFTAAEAREF
VQQALETFRWHRHATVDEETYHALHEEHRLIADVVCFPGCHINHLTPRTLDIDRVQALMP
ECGIAPKALIEGPPRRDVPILLRQTSFKALEEPVMFAGEHRGTHTARFGEIEQRGIALTP
KGRALYDRLLSEAGVGKDNLNHQRHLQEVFSPFPDSEFLLRQQGLAYFRYRLTPAGEAHR
QAFRPGDDPQPLIERGWVIAQPIIYEDFLPVSAAGIFQSNLGNEIQARSHGNASREAFEE
ALGCAVYDEFALYQQAEERSKRRCGLL