Protein Info for BWI76_RS13040 in Klebsiella michiganensis M5al

Annotation: transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 267 PF13560: HTH_31" amino acids 10 to 89 (80 residues), 50.2 bits, see alignment E=2.6e-17 PF17765: MLTR_LBD" amino acids 109 to 264 (156 residues), 113 bits, see alignment E=1.6e-36

Best Hits

KEGG orthology group: None (inferred from 90% identity to ctu:CTU_23940)

Predicted SEED Role

"Putative DNA-binding protein in cluster with Type I restriction-modification system" in subsystem Restriction-Modification System

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B353 at UniProt or InterPro

Protein Sequence (267 amino acids)

>BWI76_RS13040 transcriptional regulator (Klebsiella michiganensis M5al)
MRTLNRSRTDLAAFLRAHRERLSPAEAGLPSGTRRRTPGLRREEVAALAGVGLTWYTWLE
QGRDIGVSSTFLDNLARVLKLDAAERRHLFMLAHERPPAEPGKTWCVLPPLVRRLMHDLP
HPAFVLNLRWDVLGFNALADELFNFGSHVPERRNLLWLLFTDCTLQKRVVAWHEQAPLML
SSFRRDFTRASQSTDIPELVNELEHVSPEFKVWWRQHQVHAPCNGIRHLMIEEQPVPFEF
TSLTVDEDRHLRLVVYARQEEDAERPD