Protein Info for BWI76_RS12795 in Klebsiella michiganensis M5al

Annotation: DedA family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 165 transmembrane" amino acids 16 to 38 (23 residues), see Phobius details amino acids 58 to 78 (21 residues), see Phobius details amino acids 99 to 119 (21 residues), see Phobius details amino acids 139 to 161 (23 residues), see Phobius details PF09335: SNARE_assoc" amino acids 38 to 160 (123 residues), 53.9 bits, see alignment E=1.3e-18

Best Hits

KEGG orthology group: None (inferred from 78% identity to eae:EAE_20570)

Predicted SEED Role

"DedA-family integral membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B3D2 at UniProt or InterPro

Protein Sequence (165 amino acids)

>BWI76_RS12795 DedA family protein (Klebsiella michiganensis M5al)
MDLIISLMEYAQGRYSLVLLMVFLLTFAKSCAVISLLIPGTSGLLLFGALASASPGHFLL
MWMSASLGAIGGFWLSWLTGRRYRRHLYRIRWLNAERLARGQLFLCRHGAWALFFSRFLS
PLRATVPLVTGASGTSFWHFQLANVSSGLLWPLILLAPGALSLSF