Protein Info for BWI76_RS12715 in Klebsiella michiganensis M5al

Annotation: universal stress protein F

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 144 PF00582: Usp" amino acids 1 to 144 (144 residues), 99.6 bits, see alignment E=1.2e-32

Best Hits

Swiss-Prot: 83% identical to USPF_SALTI: Universal stress protein F (uspF) from Salmonella typhi

KEGG orthology group: K14061, universal stress protein F (inferred from 85% identity to kpu:KP1_2452)

Predicted SEED Role

"Universal stress protein F" in subsystem Universal stress protein family

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B343 at UniProt or InterPro

Protein Sequence (144 amino acids)

>BWI76_RS12715 universal stress protein F (Klebsiella michiganensis M5al)
MNRMILVPIDISDTELTDRVIKHVEAEARIDDAEVHFLTVIPSLPYYASLGMAYTAELPA
MDDLKAESESRLKEIVKKFNIPEDRIHFHVSEGSPKDKILAMAKSLPADLVIISSHRPDI
TTYLLGSNAAAVVRHAECSVLVVR