Protein Info for BWI76_RS12445 in Klebsiella michiganensis M5al

Annotation: phage shock protein operon transcriptional activator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 324 TIGR02974: psp operon transcriptional activator" amino acids 8 to 322 (315 residues), 529.8 bits, see alignment E=1.4e-163 PF14532: Sigma54_activ_2" amino acids 9 to 179 (171 residues), 68.6 bits, see alignment E=1.7e-22 PF00158: Sigma54_activat" amino acids 9 to 170 (162 residues), 208.4 bits, see alignment E=1.5e-65 PF07728: AAA_5" amino acids 31 to 149 (119 residues), 29.5 bits, see alignment E=1.7e-10 PF02954: HTH_8" amino acids 284 to 321 (38 residues), 31.7 bits, see alignment 2.7e-11

Best Hits

Swiss-Prot: 84% identical to PSPF_ECOLI: Psp operon transcriptional activator (pspF) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 90% identity to eae:EAE_20890)

Predicted SEED Role

"Psp operon transcriptional activator"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B2W9 at UniProt or InterPro

Protein Sequence (324 amino acids)

>BWI76_RS12445 phage shock protein operon transcriptional activator (Klebsiella michiganensis M5al)
MADYKDNLLGEANSFLEVLEQVSRLAPLDKPVLVIGERGTGKELIASRLHFLSSRWQGPF
ISLNCAALNENLLDSELFGHEAGAFTGASKRHPGRFERADGGTLFLDELATAPMLVQEKL
LRVIEYGELERVGGSQPLQVNVRLVCATNADLPQMVEDGLFRADLLDRLAFDVVQLPPLR
ERQSDIMLLATQFAIQMCRELGLPLFPGFSERAAETLQNYRWPGNIRELKNVVERSVYRH
GSSERELDNIIINPFRQQHTATPVEVEKTPGPTLPLDLRAFQQEQEKSLLERSLEQAKYN
QKQAAELLGLTYHQLRALLKKHQL