Protein Info for BWI76_RS12325 in Klebsiella michiganensis M5al

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1095 transmembrane" amino acids 271 to 295 (25 residues), see Phobius details amino acids 878 to 900 (23 residues), see Phobius details amino acids 912 to 961 (50 residues), see Phobius details PF06791: TMP_2" amino acids 208 to 409 (202 residues), 183.9 bits, see alignment E=3.2e-58 PF09718: Tape_meas_lam_C" amino acids 799 to 884 (86 residues), 44.2 bits, see alignment 1.7e-15

Best Hits

Predicted SEED Role

"Phage tail length tape-measure protein 1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1095 amino acids)

>BWI76_RS12325 hypothetical protein (Klebsiella michiganensis M5al)
MAEQESRLAIRLDSSGAEKQADSLAVALVKMTRAGEEAERAADDLEGSTKNLNSRLRDGA
AATGRATKFTEEQREAFRKLRDQIDPVGAAIDRIGKKYSELKGYFDRGQIDLEEYRTLAK
SLDAATNELTGVAKAERDAAKAADEQKAALQRLAAQLDPISDGFRKIATNQKLLDNAKSK
GMLSTEQYDSLSGKLKQMRGELELTQAQLGKTGMSARQTAFAMRMIPAQMTDIVVGLSTG
QSPFMVLMQQGGQLKDMFGGIGPAIKGVGGYVAGLINPFTLAVAAVGALGAALYSAEKQA
SALNKSTNVLTNVSGLNLTQTTALARGVSGLGVTYSDSVDAVGLLTQAISQNTAMYPKII
QSSSEYAKASGQDISDVLAMYQKLSTGGIQSIDDLDDKLGFLTAAQRKQADEAAASGNIA
EAQRIAFAALSGQMDELTKKLHQGANGWDNFWASVGRGASGSWDTVKEIVGGDYFDNADV
RWYQRRTQERTQRQNAGTWTQRDEDSYQSRLKGSQAIKDYTQAITEMDKASEQQANKSYL
KQLQVQADAGADAVTRAKKALQAFDNEYRSKDAGTQWEGGAAYATRRAQLAKNLKDAEDA
AAKKNKPKKEKAYTEDATTRLLAQLNQQYATLQSQYDTTEKIGTAQQSLIKWERQLADIK
IKKTLTADQKSLLANQRTITDQYEKNAALEKEIALRKDADKLTAYKNTLSSGLQNDATGL
QNSLNSNTVLSQEQKRLQELAKIASDYQKKQVELTNQRTTGQISQNLYDQETAALQQALD
QRRAMQHAYYTQIDQLNSNWQLGVQNGMQSYLNSVPTLYESVTAATTSIFSSTESAISSN
LSAMLQGTESLSNGFKNMAAGMGQAVIDALTKMAAQWLVYQAVQLLVGKTAAVSAAASMV
AQATAMSQMAGINAYASAAAIPVTGWAMAPAAMAAALAATTPLIASVTAISAAMAAGGGL
TGMAHNGIDSVPSTGTWLLEKGERVMTADTSARLDSTLENLRKNGLDATLSKPGFGTGVQ
NVNSDNSRKTTIHAPIEQHFHSPAGVTPDQMAISMAQTQKRATTDALNQVAAQVLKGDGK
VGNAMRSKYPGRGMS