Protein Info for BWI76_RS12055 in Klebsiella michiganensis M5al

Annotation: DNA single-strand annealing protein RecT-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 369 PF03837: RecT" amino acids 37 to 224 (188 residues), 131.1 bits, see alignment E=2e-42

Best Hits

KEGG orthology group: None (inferred from 96% identity to eae:EAE_21235)

Predicted SEED Role

"Gifsy-2 prophage RecT"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (369 amino acids)

>BWI76_RS12055 DNA single-strand annealing protein RecT-like protein (Klebsiella michiganensis M5al)
MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAI
VMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRT
QEITREKHGKNGKYNVTERLRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRN
SPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQRPEREINPAPAQRMSVAEIT
SGTDITTSAQDSALNIDSLADDFRDRIERAESVDAAKAIRADLDKEKAVLGTVLFTELKG
KAVQRYFMVDARNKVEAAINSLPNPGDQEAETLFAKAESTLTSSRRHLGDELYDQFRITL
DDMKPEYVG