Protein Info for BWI76_RS11660 in Klebsiella michiganensis M5al
Annotation: TVP38/TMEM64 family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 67% identical to YDJX_ECOLI: TVP38/TMEM64 family membrane protein YdjX (ydjX) from Escherichia coli (strain K12)
KEGG orthology group: None (inferred from 68% identity to esc:Entcl_2589)Predicted SEED Role
"DedA family inner membrane protein YdjX"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A285B2P0 at UniProt or InterPro
Protein Sequence (217 amino acids)
>BWI76_RS11660 TVP38/TMEM64 family protein (Klebsiella michiganensis M5al) MSIVACIIQQSGFAELVTHFDRLREAIRQSGTFGYTLYILLFIVATLFLIPGSILVIAGG VIFGPLAGTLLSLLAATFASSLSFLFARWLGRELLIKYVGQTAIFQTIEHGIARSGSDFL ILTRLIPLFPYNIQNYDYGLTAIPFWTFTFISALTTLPGIFIYTLLASELIRDGITSLFM LKLTLAGLALFALIQAAKRYARYRRIATPRLLSNDEK