Protein Info for BWI76_RS11220 in Klebsiella michiganensis M5al

Annotation: lipoprotein transporter subunit LolE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details transmembrane" amino acids 24 to 48 (25 residues), see Phobius details amino acids 270 to 294 (25 residues), see Phobius details amino acids 315 to 343 (29 residues), see Phobius details amino acids 355 to 368 (14 residues), see Phobius details amino acids 379 to 399 (21 residues), see Phobius details TIGR02212: lipoprotein releasing system, transmembrane protein, LolC/E family" amino acids 4 to 413 (410 residues), 536.9 bits, see alignment E=3.2e-165 TIGR02213: lipoprotein releasing system, transmembrane protein LolE" amino acids 5 to 414 (410 residues), 734.8 bits, see alignment E=2.5e-225 PF12704: MacB_PCD" amino acids 27 to 237 (211 residues), 68.6 bits, see alignment E=9.2e-23 PF02687: FtsX" amino acids 274 to 407 (134 residues), 65.2 bits, see alignment E=5.4e-22

Best Hits

Swiss-Prot: 87% identical to LOLE_ECOLI: Lipoprotein-releasing system transmembrane protein LolE (lolE) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 97% identity to eae:EAE_16500)

MetaCyc: 87% identical to lipoprotein release complex - inner membrane subunit (Escherichia coli K-12 substr. MG1655)
RXN-22427

Predicted SEED Role

"Lipoprotein releasing system transmembrane protein LolE"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B2F5 at UniProt or InterPro

Protein Sequence (414 amino acids)

>BWI76_RS11220 lipoprotein transporter subunit LolE (Klebsiella michiganensis M5al)
MASPLSLLIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL
AVVPHGEIEPVNQPWNNWNEALAKVEKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDP
QQESRLSSLPNFVQNNAWASFKAGEQQVILGKGVADALHVKQGDWVSIMIPNSDADHQLL
QPKRVRLHVTGILQLSGQLDHSFAMIPIQDAQQYLEMGSSVTGIAIKVTDVFHANTLVRD
AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSG
DIAVLRTLGAKDGLIRAIFVWYGLLAGSVGSLIGVAIGVICAFKLTAIINGIENLIGHKF
LSGDIYFIDFLPSELHWLDVVYVLVTALLLSLLASWYPARRASRIDPARVLSGQ