Protein Info for BWI76_RS11150 in Klebsiella michiganensis M5al

Annotation: membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 124 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF07233: DUF1425" amino acids 30 to 123 (94 residues), 85.2 bits, see alignment E=1.2e-28

Best Hits

Swiss-Prot: 70% identical to YCFL_ECOLI: Uncharacterized protein YcfL (ycfL) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 82% identity to eae:EAE_16425)

Predicted SEED Role

"YcfL protein: an outer membrane lipoprotein that is part of a salvage cluster"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B2D6 at UniProt or InterPro

Protein Sequence (124 amino acids)

>BWI76_RS11150 membrane protein (Klebsiella michiganensis M5al)
MRAAHFGALLAVTLLAGCGSHPEIPVSDRQSLVMESNVLAAGISAEVPTVTASEIQATAT
TRLFNERQVPVTVHYRFFWYDARGLEMHPLDPARSITVPAHSSVTLYGSANILGAHKARL
YLYL