Protein Info for BWI76_RS09990 in Klebsiella michiganensis M5al

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 transmembrane" amino acids 7 to 34 (28 residues), see Phobius details amino acids 73 to 96 (24 residues), see Phobius details amino acids 103 to 124 (22 residues), see Phobius details PF03733: YccF" amino acids 4 to 53 (50 residues), 39.7 bits, see alignment E=3.1e-14 amino acids 77 to 127 (51 residues), 71.2 bits, see alignment E=4.5e-24

Best Hits

Swiss-Prot: 89% identical to YCCF_SHIFL: Inner membrane protein YccF (yccF) from Shigella flexneri

KEGG orthology group: None (inferred from 91% identity to eae:EAE_15370)

Predicted SEED Role

"Inner membrane protein YccF"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B1P3 at UniProt or InterPro

Protein Sequence (148 amino acids)

>BWI76_RS09990 hypothetical protein (Klebsiella michiganensis M5al)
MRTVLNILNFILGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLLPYGNEAVHVD
ELDPQGKNSLLNAGGTLLNILWFIFFGWWLCLMHIFCGIAQCLTIIGIPVGIANFKIAAI
ALWPVGRRVVSVETARAAREANARRRFQ