Protein Info for BWI76_RS09540 in Klebsiella michiganensis M5al

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 337 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details PF04321: RmlD_sub_bind" amino acids 1 to 192 (192 residues), 38.4 bits, see alignment E=2.4e-13 PF00106: adh_short" amino acids 3 to 76 (74 residues), 26.2 bits, see alignment E=1.5e-09 PF01370: Epimerase" amino acids 3 to 234 (232 residues), 97.8 bits, see alignment E=2.1e-31 PF01073: 3Beta_HSD" amino acids 4 to 258 (255 residues), 64.5 bits, see alignment E=2.5e-21 PF13460: NAD_binding_10" amino acids 7 to 171 (165 residues), 35.8 bits, see alignment E=2.3e-12 PF07993: NAD_binding_4" amino acids 56 to 173 (118 residues), 24.9 bits, see alignment E=3.2e-09

Best Hits

Swiss-Prot: 88% identical to YBJS_ECOLI: Uncharacterized protein YbjS (ybjS) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 93% identity to kva:Kvar_3475)

Predicted SEED Role

"Putative nucleotide di-P-sugar epimerase or dehydratase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B1P2 at UniProt or InterPro

Protein Sequence (337 amino acids)

>BWI76_RS09540 hypothetical protein (Klebsiella michiganensis M5al)
MKVLVTGATSGLGRNAVEYLRNRGISVRATGRNEAMGKLLSKMGAEFVPADLTELVSSQA
KVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWSVAWGVRNFVHISSPSLYFD
YHHHRDVKEDFRPQRFANEFARSKAASEEVIHLLAQANPNTRFTILRPQSLFGPHDKVFI
PRLAQMMQHYGSVLLPRGGSALVDMTYYENAVHAMWLASQPQCDLLPSARAYNITNGEPQ
TLHSIVQKLIDELGIKCRIRSVPYPMLDIIARSMERFGNKSAKEPAFTHYGVSKLNFDFT
LDISRAQQELDYRPVVTMDEGIIRTAAWLKDHGKLHY