Protein Info for BWI76_RS09430 in Klebsiella michiganensis M5al

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 127 transmembrane" amino acids 7 to 28 (22 residues), see Phobius details amino acids 40 to 58 (19 residues), see Phobius details amino acids 65 to 83 (19 residues), see Phobius details amino acids 95 to 117 (23 residues), see Phobius details PF11045: YbjM" amino acids 4 to 117 (114 residues), 150.7 bits, see alignment E=8.1e-49

Best Hits

Swiss-Prot: 71% identical to YBJM_ECO57: Inner membrane protein YbjM (ybjM) from Escherichia coli O157:H7

KEGG orthology group: None (inferred from 90% identity to eae:EAE_14845)

Predicted SEED Role

"Inner membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B185 at UniProt or InterPro

Protein Sequence (127 amino acids)

>BWI76_RS09430 hypothetical protein (Klebsiella michiganensis M5al)
MKSERTWAGIICGFFLFIVVCLSLLLHMKGAFRATGNPELGLLFFLLPGAAASCLSPGQR
VIRPLIGAMLAAPVCLVVMRLFFVTQRSFWQELAWLFSAVFWCALGALCFLFICAWLDTR
RKPSSEE