Protein Info for BWI76_RS09130 in Klebsiella michiganensis M5al

Annotation: biofilm formation regulatory protein BssR

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 127 PF10799: YliH" amino acids 1 to 126 (126 residues), 212.8 bits, see alignment E=5.9e-68

Best Hits

Swiss-Prot: 58% identical to BSSR_ECO57: Biofilm regulator BssR (bssR) from Escherichia coli O157:H7

KEGG orthology group: None (inferred from 81% identity to eae:EAE_14770)

Predicted SEED Role

"biofilm regulator BssR"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B1C6 at UniProt or InterPro

Protein Sequence (127 amino acids)

>BWI76_RS09130 biofilm formation regulatory protein BssR (Klebsiella michiganensis M5al)
MSVDRLYRNLMNKLINANIDLDAYLQLRKAKGYMSVSENDHLRDNLFELCHEMHQHAPRL
QHAVAPEEKEALRLAGEAVASAAVCLLSGHHDCPSYIAVDVDKLESCLAVLRLNIHKLND
SQPITHA