Protein Info for BWI76_RS07585 in Klebsiella michiganensis M5al

Annotation: polar amino acid ABC transporter inner membrane subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 221 transmembrane" amino acids 15 to 42 (28 residues), see Phobius details amino acids 53 to 74 (22 residues), see Phobius details amino acids 86 to 105 (20 residues), see Phobius details amino acids 135 to 154 (20 residues), see Phobius details amino acids 183 to 206 (24 residues), see Phobius details TIGR01726: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family" amino acids 13 to 108 (96 residues), 94.3 bits, see alignment E=2.7e-31 PF00528: BPD_transp_1" amino acids 36 to 210 (175 residues), 71.1 bits, see alignment E=5.2e-24

Best Hits

KEGG orthology group: None (inferred from 90% identity to kva:Kvar_3799)

Predicted SEED Role

"Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B0B6 at UniProt or InterPro

Protein Sequence (221 amino acids)

>BWI76_RS07585 polar amino acid ABC transporter inner membrane subunit (Klebsiella michiganensis M5al)
MNQWAVIWSVRDSFIAGLLATLELFITAAIAGLIIGVVLCYLTEYQKKTLNRLIIAFVSL
MRAIPFLILAYLLYYGLPQVGISMEPWTAGLIALVIYHGAYFFEILRSQRRVFSGGYIEA
AVAQGFSRYKIFRRIILPNILSSALPLMGNQLIICLKDTAFLSIITVQEITAAANSVQAT
YFIPFNAFIVAIGLYWAISILLELLIKRLSAWGVRRGMSHV