Protein Info for BWI76_RS06890 in Klebsiella michiganensis M5al

Annotation: TonB-dependent receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 746 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF07715: Plug" amino acids 48 to 146 (99 residues), 53.4 bits, see alignment E=3.4e-18 PF00593: TonB_dep_Rec" amino acids 238 to 701 (464 residues), 162.7 bits, see alignment E=2.8e-51

Best Hits

KEGG orthology group: None (inferred from 86% identity to srr:SerAS9_0541)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AZS5 at UniProt or InterPro

Protein Sequence (746 amino acids)

>BWI76_RS06890 TonB-dependent receptor (Klebsiella michiganensis M5al)
MKNFNYSGIALAVVSALLSGASLAAESSDVGEINVKGQSLGGGLMVQEDSGKARSTLTKE
AMEKAPGASNAIDMLKYTPGMNVNSNDASGLSGIDYTMRGMNSDQIGLSMDGIPINDSGN
YAVYPNLLGDAENLEQIFVTQGSSEADGPHIGSSGGNIGLVTKRPSKEFGGFVKQTLGSH
NLSKTFARLETGEYNGFSNWLSYSHTEAKKWRGEGRNYSDKFEMNSLYEDGNGNSSNLIM
KYNRQDNSNYNTLSKAQFEEDPRQDYSTTPVYNSKGQLSKYYKLNRNPFETFTLSFTQRL
QLRDNLALTVQPYYYWGNGGSFTGQTASVLSNTSDTAGQYDLSNLTSNTYYRPSWTQTWR
PGVTTKLKWDINDEHSLDIGYWYERARQSQTQPFISIQDDGNPANVSGKPGGSDQVKDAN
GNTVQGRNQYTVTPAHKVWLQDSWFVTPDWTLVGGLAYQYVERKGDNKGSLYSAAEKRQA
TYHEFLPNFSISYKPDSENQLFYNLTRNMRTPPNYVLYNVGDSISTKPELSWNHELGWRF
QREDMLLSATLFYMRYTDRQISTTNADGDYEMMNIGSVESKGLELEWSGKLPYNFNYYTS
YTYTHSEQKDDIVSNGGHPLPTAGKTVPNVPKNMLNASLGYDDGLYYGSFGGKYVSSFYG
DLTNDEKIGGRTVFDVAAGVHLPVDKKIVKSATLRFGIDNLFDKQYLTSVRSTTFNAAAY
DGVKASTPYYNVGEERTFSVSLEATF