Protein Info for BWI76_RS06625 in Klebsiella michiganensis M5al
Annotation: acyl-CoA thioesterase II
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 89% identical to TESB_ECO57: Acyl-CoA thioesterase 2 (tesB) from Escherichia coli O157:H7
KEGG orthology group: K10805, acyl-CoA thioesterase II [EC: 3.1.2.-] (inferred from 94% identity to kpu:KP1_1287)MetaCyc: 89% identical to acyl-CoA thioesterase II (Escherichia coli K-12 substr. MG1655)
Acyl-CoA hydrolase. [EC: 3.1.2.20]; 3.1.2.- [EC: 3.1.2.20]; 3.1.2.- [EC: 3.1.2.20]; 3.1.2.- [EC: 3.1.2.20]
Predicted SEED Role
"Acyl-CoA thioesterase II (EC 3.1.2.-)" (EC 3.1.2.-)
MetaCyc Pathways
- oleate β-oxidation (32/35 steps found)
- oleate β-oxidation (thioesterase-dependent, yeast) (2/2 steps found)
- (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered) (4/5 steps found)
- photosynthetic 3-hydroxybutanoate biosynthesis (engineered) (19/26 steps found)
- acyl-CoA hydrolysis (1/1 steps found)
- firefly bioluminescence (2/14 steps found)
- jasmonic acid biosynthesis (4/19 steps found)
KEGG Metabolic Maps
- Benzoate degradation via CoA ligation
- Biosynthesis of plant hormones
- Biosynthesis of unsaturated fatty acids
- Fatty acid biosynthesis
- Limonene and pinene degradation
- Ubiquinone and menaquinone biosynthesis
- alpha-Linolenic acid metabolism
Isozymes
Compare fitness of predicted isozymes for: 3.1.2.-
Use Curated BLAST to search for 3.1.2.- or 3.1.2.20
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A285AZY3 at UniProt or InterPro
Protein Sequence (291 amino acids)
>BWI76_RS06625 acyl-CoA thioesterase II (Klebsiella michiganensis M5al) MSQALTNLLALLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPAERLIHSF HSYFLRPGDSQKPIIYDVEVLRDGNSFSARRVAAVQNGKPIFYMTASFQAPEPGYEHQKT MPAAPAPDALPSETDIARKLAHLLPPQVKEKFLCDKPLEIRPVEFHNPLKGHVAEPTRQV WIRANGAVPEDLRIHQYLLGYASDFNFLPVALQPHGVGFLEPGMQVATIDHSMWFHRPFN INDWLLYSVESTSASSARGFVRGEFYTQDGTLVASTVQEGVMRNRNLFPGK