Protein Info for BWI76_RS06295 in Klebsiella michiganensis M5al

Annotation: S-adenosylmethionine:tRNA ribosyltransferase-isomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 356 TIGR00113: S-adenosylmethionine:tRNA ribosyltransferase-isomerase" amino acids 1 to 344 (344 residues), 554.1 bits, see alignment E=5.6e-171 PF02547: Queuosine_synth" amino acids 4 to 343 (340 residues), 450 bits, see alignment E=2.4e-139

Best Hits

Swiss-Prot: 94% identical to QUEA_ECO8A: S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA) from Escherichia coli O8 (strain IAI1)

KEGG orthology group: K07568, S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC: 5.-.-.-] (inferred from 94% identity to eco:b0405)

MetaCyc: 94% identical to tRNA preQ134 S-adenosylmethionine ribosyltransferase-isomerase (Escherichia coli K-12 substr. MG1655)
RXN0-1342 [EC: 2.4.99.17]

Predicted SEED Role

"S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)" in subsystem Queuosine-Archaeosine Biosynthesis (EC 5.-.-.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 5.-.-.-

Use Curated BLAST to search for 2.4.99.17 or 5.-.-.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AZI6 at UniProt or InterPro

Protein Sequence (356 amino acids)

>BWI76_RS06295 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Klebsiella michiganensis M5al)
MRVADFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNN
TRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESIKATMV
ARHDALFEVAFDDARSVLEILNAIGHMPLPPYIERPDEEADRELYQTVYSEKPGAVAAPT
AGLHFDEPLLAKLREKGVEMAFVTLHVGAGTFQPVRVDSIEDHIMHSEYAEVPQEVVDAV
LAAKARGSRVIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFIYPGYQYKVIDALVTNF
HLPESTLIMLVSAFAGYQHTMNAYKAAVEQKYRFFSYGDAMFITYNPQAIFERVGE