Protein Info for BWI76_RS06230 in Klebsiella michiganensis M5al

Annotation: DNA-binding response regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 229 TIGR02154: phosphate regulon transcriptional regulatory protein PhoB" amino acids 1 to 226 (226 residues), 384.7 bits, see alignment E=5.6e-120 PF00072: Response_reg" amino acids 5 to 117 (113 residues), 103 bits, see alignment E=1.1e-33 PF00486: Trans_reg_C" amino acids 151 to 225 (75 residues), 100.9 bits, see alignment E=3.4e-33

Best Hits

Swiss-Prot: 98% identical to PHOB_KLEPN: Phosphate regulon transcriptional regulatory protein PhoB (phoB) from Klebsiella pneumoniae

KEGG orthology group: None (inferred from 100% identity to eae:EAE_12435)

Predicted SEED Role

"Phosphate regulon transcriptional regulatory protein PhoB (SphR)" in subsystem High affinity phosphate transporter and control of PHO regulon or Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AZF3 at UniProt or InterPro

Protein Sequence (229 amino acids)

>BWI76_RS06230 DNA-binding response regulator (Klebsiella michiganensis M5al)
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDFDSAVNQLNEPWPDLILLDWMLPGGS
GLQFIKQLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM
RRISPMAVEEVIEMQGLSLDPSSHRVMTGENPLDMGPTEFKLLHFFMTHPERVYSREQLL
NHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDRMVQTVRGTGYRFSARF