Protein Info for BWI76_RS05865 in Klebsiella michiganensis M5al

Annotation: ABC transporter permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 522 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details amino acids 36 to 38 (3 residues), see Phobius details transmembrane" amino acids 21 to 35 (15 residues), see Phobius details amino acids 47 to 67 (21 residues), see Phobius details amino acids 76 to 101 (26 residues), see Phobius details amino acids 107 to 129 (23 residues), see Phobius details amino acids 191 to 218 (28 residues), see Phobius details amino acids 226 to 248 (23 residues), see Phobius details amino acids 277 to 297 (21 residues), see Phobius details amino acids 331 to 352 (22 residues), see Phobius details amino acids 364 to 383 (20 residues), see Phobius details amino acids 389 to 406 (18 residues), see Phobius details amino acids 435 to 457 (23 residues), see Phobius details amino acids 483 to 502 (20 residues), see Phobius details PF00528: BPD_transp_1" amino acids 87 to 249 (163 residues), 67.1 bits, see alignment E=8.9e-23 amino acids 343 to 500 (158 residues), 81.1 bits, see alignment E=4.4e-27

Best Hits

KEGG orthology group: K02050, sulfonate/nitrate/taurine transport system permease protein (inferred from 96% identity to kpe:KPK_3095)

Predicted SEED Role

"Alkanesulfonates transport system permease protein" in subsystem Alkanesulfonate assimilation or Alkanesulfonates Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AZ50 at UniProt or InterPro

Protein Sequence (522 amino acids)

>BWI76_RS05865 ABC transporter permease (Klebsiella michiganensis M5al)
MSQMILRTDAPARPGFRLNGWPWLLPALLLLLWYVAAREGWMPEQILPAPSVVADTALSL
LSGDLLAQWGFSLQHLALGLLLGATAGTLLGALFGLVPAAAQRVEPLFYALAQIPTLGWI
PLFMVLFGIDNGLKLAVIVKTTVVPMTINTQQAVAGVPLTLSEAARVMNFSRWQRLRWLE
IPASLPGWFTGLRLALSQAWVSLIVVELLASSEGIGYLMVWGRQLFQLDIVFVTIAVVGL
SGMLMEWAANRACARLVFWPQPAAGRLAWKPQASWRALQLPLVLLALWQLASQWGWIDGA
LFSSPLAVATRFMQGALSGELTAAMLASLGRAFVGGVLGIAGGLLCGLLLALRPRAGQIF
TPTLNVLRHIALFAWLPLLTAWVGNDNGGKIVFIALASFFPMFFSTRQAVLQRNPQLDEV
ARVLRLGEVARLRRVILPGAAPGIFAGLRLALIYAWLGNIGAEYFMSSGVGIGSLMINAQ
QLLDMPTILCGMVLVGITGAALDKAGRLLEMRVTRWRQQEQL