Protein Info for BWI76_RS05040 in Klebsiella michiganensis M5al

Annotation: type II secretion system protein N

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 252 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details PF01203: T2SSN" amino acids 37 to 241 (205 residues), 142.8 bits, see alignment E=8.5e-46

Best Hits

Swiss-Prot: 100% identical to GSPN_KLEPN: Type II secretion system protein N (pulN) from Klebsiella pneumoniae

KEGG orthology group: K02463, general secretion pathway protein N (inferred from 49% identity to kva:Kvar_4232)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AYQ1 at UniProt or InterPro

Protein Sequence (252 amino acids)

>BWI76_RS05040 type II secretion system protein N (Klebsiella michiganensis M5al)
MKNRLTIGLLLAAIYLFWLLLSAPARLLALTLSDDARLAQTSGTLWQGEAHQASWRGVEL
AYLRWEFGFSTWLPGWHIRFNDPSGLRGQAWLHGLNEFVVREGRLVIPARLISQRLALGM
PLEARGQLALTLPEASFNANGCRRIAASAVQWQDAALSSPAGLLELAQVNGKLSCTPAGA
LAVALTQDSHQLSLTGQGVLTPDGRYTFNGTLQPRQAAPALLTLLVAQNGRKDEQGRIPW
RWQGEWLSEEKK