Protein Info for BWI76_RS04560 in Klebsiella michiganensis M5al
Annotation: holo-ACP synthase CitX
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 36% identical to CITX_SHIF8: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (citX) from Shigella flexneri serotype 5b (strain 8401)
KEGG orthology group: K05964, holo-ACP synthase [EC: 2.7.7.61] (inferred from 89% identity to kpn:KPN_00056)MetaCyc: 36% identical to apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (Escherichia coli K-12 substr. MG1655)
Citrate lyase holo-[acyl-carrier-protein] synthase. [EC: 2.7.7.61]
Predicted SEED Role
"Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)" (EC 2.7.7.61)
MetaCyc Pathways
- citrate lyase activation (3/5 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.7.61
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A285AYK1 at UniProt or InterPro
Protein Sequence (179 amino acids)
>BWI76_RS04560 holo-ACP synthase CitX (Klebsiella michiganensis M5al) MSVDTLAREGVSMEALLAAKEQRAARQADWLAHYQRPLISLTLVTPGAVKDSIRYRNMMG VALQACDQMLWKHRWQTLDRQVLWLPTGPEALWCVDHAASEIKAFCTDLEHTHPLGRLWD IDVICPKNGLVGRQSMGENQRRCLLCDEPAHACARSRRHDTGEVVARVEQMIDAWFARD