Protein Info for BWI76_RS03935 in Klebsiella michiganensis M5al

Annotation: GntR family transcriptional regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 304 PF07729: FCD" amino acids 159 to 286 (128 residues), 42.5 bits, see alignment E=1.2e-14

Best Hits

Swiss-Prot: 83% identical to LGOR_ECOLI: Probable HTH-type transcriptional regulator LgoR (lgoR) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 95% identity to kpe:KPK_4816)

Predicted SEED Role

"Regulator of L-galactonate catabolism YjjM"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AY30 at UniProt or InterPro

Protein Sequence (304 amino acids)

>BWI76_RS03935 GntR family transcriptional regulator (Klebsiella michiganensis M5al)
MSRSQNLRHNVINQVINDMARGFLPSPLPSQSALAEMYNISRTTVRHILSHLCERGVLHQ
VKQDYQILRQPEVQDGFDGASASLAEQNRLFEQAFFTMINQRQLRAGEMFSELQLARAAG
VSPVVVREFLLKFSRYNLIESEKRGQWNMKKFELSWAEQLFELREMLETHALQHFLNLPD
NDARWLQARTLLERHRALRDSIGDSFRMFSQLDRDFHTLLLSAAENIFFNQSLEIISVIF
HFHYQWDESDLKQRNIIAIDEHMTILSALICRSDLDANLALRNHLNSAKQSMINSLKQSE
SLAH