Protein Info for BWI76_RS03295 in Klebsiella michiganensis M5al

Annotation: transposase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 87 PF01527: HTH_Tnp_1" amino acids 2 to 70 (69 residues), 82.8 bits, see alignment E=2.4e-27 PF13518: HTH_28" amino acids 12 to 44 (33 residues), 28.5 bits, see alignment E=2e-10

Best Hits

Swiss-Prot: 71% identical to YI74_BURM1: Insertion element IS407 uncharacterized 10.0 kDa protein (Bmul_4720) from Burkholderia multivorans (strain ATCC 17616 / 249)

KEGG orthology group: K07497, putative transposase (inferred from 92% identity to ypg:YpAngola_A1241)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (87 amino acids)

>BWI76_RS03295 transposase (Klebsiella michiganensis M5al)
MKKRFPDEQIISILREAEAGVSARELCRKHAISDATFYTWRKKFGGMEVPEVKRLKSLEE
ENARLKKLLAEAMLDKEALQVALGRKF