Protein Info for BWI76_RS01860 in Klebsiella michiganensis M5al

Annotation: 4-hydroxybenzoate octaprenyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 289 transmembrane" amino acids 22 to 40 (19 residues), see Phobius details amino acids 46 to 69 (24 residues), see Phobius details amino acids 99 to 132 (34 residues), see Phobius details amino acids 155 to 158 (4 residues), see Phobius details amino acids 164 to 182 (19 residues), see Phobius details amino acids 213 to 233 (21 residues), see Phobius details amino acids 239 to 258 (20 residues), see Phobius details amino acids 269 to 288 (20 residues), see Phobius details TIGR01474: 4-hydroxybenzoate polyprenyl transferase" amino acids 11 to 287 (277 residues), 367.7 bits, see alignment E=2.2e-114 PF01040: UbiA" amino acids 28 to 271 (244 residues), 243.5 bits, see alignment E=1.1e-76

Best Hits

Swiss-Prot: 94% identical to UBIA_KLEP3: 4-hydroxybenzoate octaprenyltransferase (ubiA) from Klebsiella pneumoniae (strain 342)

KEGG orthology group: K03179, 4-hydroxybenzoate octaprenyltransferase [EC: 2.5.1.-] (inferred from 94% identity to kpu:KP1_0280)

MetaCyc: 90% identical to 4-hydroxybenzoate octaprenyltransferase (Escherichia coli K-12 substr. MG1655)
4-hydroxybenzoate nonaprenyltransferase. [EC: 2.5.1.39]

Predicted SEED Role

"4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39)" (EC 2.5.1.39)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.-

Use Curated BLAST to search for 2.5.1.- or 2.5.1.39

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AW84 at UniProt or InterPro

Protein Sequence (289 amino acids)

>BWI76_RS01860 4-hydroxybenzoate octaprenyltransferase (Klebsiella michiganensis M5al)
MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGIPPLWILAVFVAGVWLMR
AAGCVVNDYADRKFDGHVKRTARRPLPSGDVSEKEARTLFVVLVLLSFLLVLTLNTMTIL
LSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFSAVSESLPLSCWLMFLANILWA
VAYDTQYAMVDRDDDVKIGIKSTAILFGDNDRLIIGILQVAVLGLMAAVGWLSGLGWEYY
WSLFIAAALFAWQQKLIFKRERDACFKAFMNNNYVGLVLFLGLAMGYMQ